Day 50: DDEC6 -- Step 4-7 (5-7)
I finished reviewing the implementation for steps 4-7 in DDEC6 and can now generate DDEC6 charges in cclib
. With my mentors’ review and a few more subsequent PRs (docs and a few more tests), this should be ready.
Another few remaining tasks include phasing out stockholder partition ( = Hirshfeld analysis) as a separate method and in the long term, parallelizing the method. This method is almost “embarrassingly parallel” and would benefit a lot from parallel execution in most platforms. chargemol
does this as well and shows much better performance in any machine. But one should note that cube
file generation in cclib
is serial as well and this is also quite parallel in nature, which means that there are quite a few methods that will benefit from parallel execution or vectorization in numpy
.